Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 TIMM17BP1-201ENST00000545713 516 ntBASIC14.3□□□□□ -0.12
IFT52Q9Y366 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 AL158211.3-201ENST00000607385 239 ntBASIC14.3□□□□□ -0.12
IFT52Q9Y366 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.3□□□□□ -0.12
IFT52Q9Y366 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 TCAF1P1-201ENST00000414990 2232 ntBASIC14.3□□□□□ -0.12
IFT52Q9Y366 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
IFT52Q9Y366 AL139385.1-201ENST00000611744 3272 ntBASIC14.3□□□□□ -0.12
IFT52Q9Y366 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IFT52Q9Y366 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 AC104457.1-201ENST00000401024 814 ntBASIC14.29□□□□□ -0.12
IFT52Q9Y366 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
IFT52Q9Y366 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
IFT52Q9Y366 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFT52Q9Y366 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.28□□□□□ -0.12
IFT52Q9Y366 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms