Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 INE2-201ENST00000630399 1874 ntBASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 GPX1P2-201ENST00000429271 606 ntBASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRCH1Q9Y2L9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AL049840.3-201ENST00000602669 611 ntBASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AL139424.1-201ENST00000607572 797 ntBASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 AC116407.3-201ENST00000623905 1129 ntBASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRCH1Q9Y2L9 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms