Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 AC023090.2-201ENST00000625182 2110 ntBASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SH2B3Q9UQQ2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 AC018529.2-202ENST00000611482 3087 ntBASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 NUS1P3-201ENST00000423502 862 ntBASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 AC026434.2-201ENST00000506094 1078 ntBASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 AC106760.1-201ENST00000508690 800 ntBASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 AL513477.1-201ENST00000602865 2407 ntBASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SH2B3Q9UQQ2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ACTBP8-201ENST00000403258 1108 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AL512384.1-201ENST00000406683 331 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 ACTG1P3-201ENST00000431775 1114 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC012441.1-201ENST00000446669 685 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC114812.1-204ENST00000449669 728 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 USP32P1-208ENST00000506594 1164 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC068587.3-201ENST00000526613 355 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 DUX4L47-201ENST00000566374 394 ntBASIC14.63□□□□□ -0.07
SH2B3Q9UQQ2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms