Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 AP000358.1-201ENST00000456260 156 ntBASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
SHANK2Q9UPX8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SHANK2Q9UPX8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC21.95■■□□□ 1.11
SHANK2Q9UPX8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 DUTP3-201ENST00000450025 415 ntBASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 AC093752.3-201ENST00000567343 901 ntBASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 RPL17P45-201ENST00000586289 509 ntBASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SHANK2Q9UPX8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 AC074138.1-201ENST00000611182 1303 ntBASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SHANK2Q9UPX8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 AC092171.5-201ENST00000608012 942 ntBASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SHANK2Q9UPX8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms