Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZC3H4Q9UPT8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 MIR3188-201ENST00000583494 85 ntBASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 AC009560.1-201ENST00000620208 434 ntBASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZC3H4Q9UPT8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 AC084364.1-201ENST00000551967 1556 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 RN7SL470P-201ENST00000583069 259 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 MIR6720-201ENST00000611664 98 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 AC012183.1-201ENST00000625197 499 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 AC006058.4-201ENST00000624016 1670 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 KRT8P31-201ENST00000504812 1408 ntBASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZC3H4Q9UPT8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AL354861.1-201ENST00000445213 355 ntBASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AC026410.1-201ENST00000507366 1101 ntBASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AP000911.2-201ENST00000534330 502 ntBASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AC084781.1-201ENST00000613737 656 ntBASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 AC009093.2-202ENST00000620513 2079 ntBASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZC3H4Q9UPT8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZC3H4Q9UPT8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms