Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.27■□□□□ 0.84
PHF8Q9UPP1 AP000845.1-201ENST00000581677 2131 ntBASIC20.27■□□□□ 0.84
PHF8Q9UPP1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PHF8Q9UPP1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PHF8Q9UPP1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.27■□□□□ 0.84
PHF8Q9UPP1 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.27■□□□□ 0.84
PHF8Q9UPP1 AP005117.1-202ENST00000581724 1908 ntBASIC20.27■□□□□ 0.84
PHF8Q9UPP1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHF8Q9UPP1 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHF8Q9UPP1 TMBIM7P-202ENST00000641474 1516 ntBASIC20.27■□□□□ 0.83
PHF8Q9UPP1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PHF8Q9UPP1 AC013726.1-201ENST00000563747 2285 ntBASIC20.27■□□□□ 0.83
PHF8Q9UPP1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC092850.2-201ENST00000623821 2697 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC007292.2-201ENST00000593524 1812 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 RNA5SP359-201ENST00000364838 113 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 Z69890.1-201ENST00000382990 339 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC087392.5-201ENST00000612517 489 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC005618.3-201ENST00000624928 458 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AP001002.2-201ENST00000625137 386 ntBASIC20.26■□□□□ 0.83
PHF8Q9UPP1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PHF8Q9UPP1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 FTH1P22-201ENST00000456305 520 ntBASIC20.25■□□□□ 0.83
PHF8Q9UPP1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 AC141586.1-203ENST00000567242 366 ntBASIC20.25■□□□□ 0.83
PHF8Q9UPP1 AC007326.1-201ENST00000604539 458 ntBASIC20.25■□□□□ 0.83
PHF8Q9UPP1 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
PHF8Q9UPP1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms