Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 SALL4P5-201ENST00000419001 1760 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
RIMBP3Q9UFD9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RIMBP3Q9UFD9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RIMBP3Q9UFD9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.27
RIMBP3Q9UFD9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 AC091769.1-201ENST00000619576 568 ntBASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 LILRP2-202ENST00000413572 1383 ntBASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RIMBP3Q9UFD9 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 RN7SL684P-201ENST00000465665 294 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 RN7SL838P-201ENST00000481676 295 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC099343.1-201ENST00000513481 609 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 KRT8P34-201ENST00000577607 1044 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 LINP1-201ENST00000417112 917 ntTSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 NALT1-202ENST00000450304 437 ntTSL 3 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 RNF7-205ENST00000480908 782 ntTSL 4 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 GRAMD4P6-201ENST00000556999 244 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC23■■□□□ 1.27
RIMBP3Q9UFD9 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
RIMBP3Q9UFD9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 AC117503.4-201ENST00000623229 1418 ntBASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 ILF3-AS1-201ENST00000591501 1983 ntBASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 KRT19P4-201ENST00000443208 943 ntBASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 AP000533.1-201ENST00000456143 1177 ntBASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 DRG2-220ENST00000583355 891 ntTSL 3 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 PPY-202ENST00000587006 431 ntTSL 3 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 AC005777.1-201ENST00000588332 187 ntBASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RIMBP3Q9UFD9 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 AC067931.2-201ENST00000623655 2003 ntBASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC22.98■■□□□ 1.27
RIMBP3Q9UFD9 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms