Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 AL512306.1-201ENST00000432698 848 ntBASIC13.85□□□□□ -0.19
DKK4Q9UBT3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 AC138701.2-201ENST00000553634 226 ntBASIC13.85□□□□□ -0.19
DKK4Q9UBT3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 FTLP5-201ENST00000586853 534 ntBASIC13.85□□□□□ -0.19
DKK4Q9UBT3 AC140113.1-201ENST00000603467 169 ntBASIC13.85□□□□□ -0.19
DKK4Q9UBT3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 MME-218ENST00000625667 363 ntTSL 5 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DKK4Q9UBT3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 RNA5SP359-201ENST00000364838 113 ntBASIC13.84□□□□□ -0.19
DKK4Q9UBT3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.84□□□□□ -0.19
DKK4Q9UBT3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 RNA5SP417-201ENST00000516459 108 ntBASIC13.84□□□□□ -0.19
DKK4Q9UBT3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 AC006548.2-201ENST00000605217 529 ntBASIC13.84□□□□□ -0.19
DKK4Q9UBT3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.84□□□□□ -0.19
DKK4Q9UBT3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
DKK4Q9UBT3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
DKK4Q9UBT3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 AC004554.1-201ENST00000422830 1468 ntBASIC13.83□□□□□ -0.2
DKK4Q9UBT3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.83□□□□□ -0.2
DKK4Q9UBT3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms