Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 AC012508.2-201ENST00000567613 1472 ntBASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PARPBPQ9NWS1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC112693.3-201ENST00000624819 1983 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 KRT8P44-201ENST00000441609 1350 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC104457.1-201ENST00000401024 814 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 NME2P1-201ENST00000426182 414 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC114812.1-204ENST00000449669 728 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC007389.4-201ENST00000454674 793 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PARPBPQ9NWS1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 AC007787.1-201ENST00000588095 1583 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 WASH3P-207ENST00000560956 1394 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ACTG1P3-201ENST00000431775 1114 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms