Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 AC007551.1-201ENST00000457394 519 ntBASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 AL354718.3-201ENST00000616414 581 ntBASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 AL162274.1-201ENST00000617191 1098 ntBASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 CR382287.1-201ENST00000623954 586 ntBASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ECHDC1Q9NTX5 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 CROCCP4-201ENST00000457096 498 ntBASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 CLUHP2-201ENST00000426660 1303 ntBASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC1Q9NTX5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ECHDC1Q9NTX5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
ECHDC1Q9NTX5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.39■□□□□ 0.54
ECHDC1Q9NTX5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
ECHDC1Q9NTX5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AC067930.6-201ENST00000623257 4947 ntBASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 RNA5SP486-201ENST00000515961 83 ntBASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 KRT90P-201ENST00000549264 1064 ntBASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC1Q9NTX5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms