Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 USP10-219ENST00000570191 2717 ntTSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 HAUS4P1-201ENST00000406739 1145 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC022447.6-201ENST00000515522 438 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 DUX4L18-201ENST00000553347 1267 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 MIR4508-201ENST00000584178 70 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 WASH6P-202ENST00000359512 1437 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC009474.1-201ENST00000455096 1565 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 VDR-208ENST00000550325 3925 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CR2-202ENST00000367058 4063 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC241952.1-201ENST00000612480 6897 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 CEP89-207ENST00000591863 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC026271.4-201ENST00000578214 1833 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 AC002350.2-201ENST00000623894 1828 ntBASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDC42SE1Q9NRR8 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 GPAA1P2-202ENST00000606848 1787 ntBASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 GCM1-201ENST00000259803 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 DPY19L2P3-201ENST00000414296 2326 ntBASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 KCNMA1-259ENST00000639406 5567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDC42SE1Q9NRR8 SRD5A1P1-201ENST00000442297 786 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms