Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 HSPB1P2-201ENST00000448722 546 ntBASIC15.71■□□□□ 0.11
HPS4Q9NQG7 AKR7A2P1-201ENST00000460134 915 ntBASIC15.71■□□□□ 0.11
HPS4Q9NQG7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HPS4Q9NQG7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.71■□□□□ 0.1
HPS4Q9NQG7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 POM121L8P-201ENST00000417732 1281 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 FAM8A4P-201ENST00000435433 1213 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 POM121L9P-203ENST00000441984 1285 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 IGHJ2P-201ENST00000454480 60 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 AC091804.1-201ENST00000486888 567 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ACTG1P17-201ENST00000558391 1119 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 SAMD11P1-201ENST00000571429 661 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 AC244452.3-201ENST00000636814 210 ntBASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms