Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC018529.2-202ENST00000611482 3087 ntBASIC13.88□□□□□ -0.19
HMG20AQ9NP66 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 AC004945.1-201ENST00000416738 983 ntBASIC13.88□□□□□ -0.19
HMG20AQ9NP66 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 AC145285.3-201ENST00000564603 959 ntBASIC13.88□□□□□ -0.19
HMG20AQ9NP66 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.88□□□□□ -0.19
HMG20AQ9NP66 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMG20AQ9NP66 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 AC104109.2-201ENST00000602919 1418 ntBASIC13.87□□□□□ -0.19
HMG20AQ9NP66 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 AC019294.4-201ENST00000561777 2905 ntBASIC13.87□□□□□ -0.19
HMG20AQ9NP66 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMG20AQ9NP66 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms