Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 CLK3P2-201ENST00000427566 1453 ntBASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 AL589987.1-201ENST00000453380 819 ntBASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 DUX4L27-201ENST00000554796 1261 ntBASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRTM1Q9HBL6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 SPDYE18-201ENST00000510091 1050 ntBASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 RFPL4AP1-201ENST00000530883 850 ntBASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 AC135586.1-201ENST00000539323 574 ntBASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 SRD5A3P1-201ENST00000603021 949 ntBASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRTM1Q9HBL6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.61□□□□□ -0.07
LRTM1Q9HBL6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms