Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AP000347.1-202ENST00000435868 847 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AC069120.2-201ENST00000524091 540 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SAMD11P1-201ENST00000571429 661 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AC027612.4-201ENST00000605371 583 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
POLR2J2Q9GZM3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.08□□□□□ -0.15
POLR2J2Q9GZM3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC004967.1-201ENST00000453589 447 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC067863.1-201ENST00000494933 530 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC004066.1-201ENST00000502488 802 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC025678.2-201ENST00000562061 970 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC140878.1-201ENST00000565277 250 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC092337.1-201ENST00000568699 1129 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AL109936.8-201ENST00000641772 604 ntBASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.08□□□□□ -0.16
POLR2J2Q9GZM3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 BX640514.1-201ENST00000583223 1918 ntBASIC14.07□□□□□ -0.16
POLR2J2Q9GZM3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms