Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 LINC01101-201ENST00000622953 1884 ntBASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 AL391069.4-201ENST00000609583 481 ntBASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.35□□□□□ -0.11
YIPF4Q9BSR8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 CICP14-201ENST00000629111 2732 ntBASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 FAM86LP-201ENST00000478302 853 ntBASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 LINC00552-201ENST00000625151 2579 ntBASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
YIPF4Q9BSR8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
YIPF4Q9BSR8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
YIPF4Q9BSR8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
YIPF4Q9BSR8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
YIPF4Q9BSR8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms