Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TUBA1CQ9BQE3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 DGCR9-201ENST00000609630 2415 ntBASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 SPTLC1P1-201ENST00000447199 261 ntBASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ZNF890P-202ENST00000530367 1156 ntBASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 MIR6069-201ENST00000620069 79 ntBASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.4□□□□□ -0.1
TUBA1CQ9BQE3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TUBA1CQ9BQE3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TUBA1CQ9BQE3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC152010.1-201ENST00000415779 2006 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC113367.3-201ENST00000508316 1912 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC011474.4-201ENST00000623523 2076 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC015922.1-201ENST00000421102 1152 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 CICP8-201ENST00000455800 2813 ntBASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TUBA1CQ9BQE3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms