Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.53■□□□□ 0.08
CDCA3Q99618 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.53■□□□□ 0.08
CDCA3Q99618 AC009560.1-201ENST00000620208 434 ntBASIC15.53■□□□□ 0.08
CDCA3Q99618 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.52■□□□□ 0.08
CDCA3Q99618 KRT8P31-201ENST00000504812 1408 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CDCA3Q99618 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDCA3Q99618 CYP2T1P-202ENST00000641596 2535 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDCA3Q99618 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CDCA3Q99618 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCA3Q99618 Z69890.1-201ENST00000382990 339 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 PIN4P1-201ENST00000451079 396 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.52■□□□□ 0.08
CDCA3Q99618 NDUFS6P1-201ENST00000485187 316 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.52■□□□□ 0.08
CDCA3Q99618 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.52■□□□□ 0.08
CDCA3Q99618 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDCA3Q99618 AC007326.1-201ENST00000604539 458 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 AL132780.4-201ENST00000624870 1135 ntBASIC15.52■□□□□ 0.08
CDCA3Q99618 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.52■□□□□ 0.08
CDCA3Q99618 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.52■□□□□ 0.08
CDCA3Q99618 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.52■□□□□ 0.07
CDCA3Q99618 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.52■□□□□ 0.07
CDCA3Q99618 AC009090.5-201ENST00000624886 2285 ntBASIC15.52■□□□□ 0.07
CDCA3Q99618 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.52■□□□□ 0.07
CDCA3Q99618 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDCA3Q99618 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDCA3Q99618 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.51■□□□□ 0.07
CDCA3Q99618 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 KRT18P66-201ENST00000452970 1269 ntBASIC15.51■□□□□ 0.07
CDCA3Q99618 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 NUDT4P2-201ENST00000578341 546 ntBASIC15.51■□□□□ 0.07
CDCA3Q99618 MIR4522-201ENST00000584932 87 ntBASIC15.51■□□□□ 0.07
CDCA3Q99618 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 AC018629.1-201ENST00000623381 1736 ntBASIC15.51■□□□□ 0.07
CDCA3Q99618 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.51■□□□□ 0.07
CDCA3Q99618 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDCA3Q99618 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDCA3Q99618 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms