Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.19■□□□□ 0.18
YME1L1Q96TA2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
YME1L1Q96TA2 AL360270.3-201ENST00000609118 1348 ntBASIC16.19■□□□□ 0.18
YME1L1Q96TA2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
YME1L1Q96TA2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 NOC2LP1-201ENST00000450578 752 ntBASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC104784.1-201ENST00000473096 294 ntBASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC009093.2-202ENST00000620513 2079 ntBASIC16.18■□□□□ 0.18
YME1L1Q96TA2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 INE2-201ENST00000630399 1874 ntBASIC16.18■□□□□ 0.18
YME1L1Q96TA2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 AC068418.2-201ENST00000577309 3703 ntBASIC16.18■□□□□ 0.18
YME1L1Q96TA2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
YME1L1Q96TA2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 AC138696.2-201ENST00000607376 223 ntBASIC16.17■□□□□ 0.18
YME1L1Q96TA2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
YME1L1Q96TA2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 AC092850.2-201ENST00000623821 2697 ntBASIC16.16■□□□□ 0.18
YME1L1Q96TA2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
YME1L1Q96TA2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms