Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP000593.2-201ENST00000542775 1433 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AL109954.1-202ENST00000564051 2148 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 BRWD1P1-201ENST00000401091 371 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 CNN2P10-201ENST00000443067 918 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 Z93015.1-201ENST00000451718 390 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 EEF1DP1-201ENST00000585891 896 ntBASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDK5RAP1Q96SZ6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 PPT1-215ENST00000641471 2368 ntBASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 AL136309.1-201ENST00000403917 691 ntBASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 AC138035.3-201ENST00000622706 2791 ntBASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDK5RAP1Q96SZ6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 FKBP4P6-201ENST00000457486 1332 ntBASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDK5RAP1Q96SZ6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms