Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 AC131206.1-201ENST00000538078 1211 ntBASIC15.97■□□□□ 0.15
CASD1Q96PB1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 MIR5572-201ENST00000583188 137 ntBASIC15.97■□□□□ 0.15
CASD1Q96PB1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 AC006453.1-201ENST00000636037 1257 ntBASIC15.97■□□□□ 0.15
CASD1Q96PB1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 AC136621.1-201ENST00000624017 2304 ntBASIC15.97■□□□□ 0.15
CASD1Q96PB1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.97■□□□□ 0.15
CASD1Q96PB1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CASD1Q96PB1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 AC006480.2-201ENST00000609770 1337 ntBASIC15.96■□□□□ 0.15
CASD1Q96PB1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 AC078875.1-201ENST00000431907 724 ntBASIC15.96■□□□□ 0.15
CASD1Q96PB1 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 MIR4754-201ENST00000582477 89 ntBASIC15.96■□□□□ 0.15
CASD1Q96PB1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CASD1Q96PB1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CASD1Q96PB1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CASD1Q96PB1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
CASD1Q96PB1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CASD1Q96PB1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CASD1Q96PB1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.96■□□□□ 0.14
CASD1Q96PB1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AL645933.1-201ENST00000440087 609 ntBASIC15.95■□□□□ 0.14
CASD1Q96PB1 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.95■□□□□ 0.14
CASD1Q96PB1 CROCCP1-201ENST00000426910 5675 ntBASIC15.95■□□□□ 0.14
CASD1Q96PB1 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CASD1Q96PB1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.95■□□□□ 0.14
CASD1Q96PB1 WASH3P-207ENST00000560956 1394 ntBASIC15.95■□□□□ 0.14
CASD1Q96PB1 AC008894.3-201ENST00000624324 3103 ntBASIC15.95■□□□□ 0.14
CASD1Q96PB1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms