Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 AL391825.1-201ENST00000457671 1364 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 AC098614.1-201ENST00000368528 745 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 AC026434.2-201ENST00000506094 1078 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 AC104596.2-201ENST00000512793 793 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 AL359711.2-201ENST00000563105 872 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 TMEM261P1-201ENST00000604899 340 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 AGGF1P1-201ENST00000509500 2073 ntBASIC15.42■□□□□ 0.06
RTP4Q96DX8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.42■□□□□ 0.06
RTP4Q96DX8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RTP4Q96DX8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC087499.6-201ENST00000411576 835 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 KLF2P2-201ENST00000416807 1039 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 SOCS2P1-201ENST00000417727 557 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC098850.1-201ENST00000419919 790 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 EIF3FP3-201ENST00000434851 1086 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 GIMAP3P-201ENST00000495150 836 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC022447.6-201ENST00000515522 438 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AL008721.1-201ENST00000609964 604 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 AC027601.5-201ENST00000624065 2482 ntBASIC15.41■□□□□ 0.06
RTP4Q96DX8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RTP4Q96DX8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RTP4Q96DX8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RTP4Q96DX8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.4■□□□□ 0.06
RTP4Q96DX8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTP4Q96DX8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms