Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CU639417.3-201ENST00000624240 1404 ntBASIC13.32□□□□□ -0.28
TMEM54Q969K7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 AL138709.1-201ENST00000614840 1693 ntBASIC13.32□□□□□ -0.28
TMEM54Q969K7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 AL512384.1-201ENST00000406683 331 ntBASIC13.32□□□□□ -0.28
TMEM54Q969K7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 AC004466.1-201ENST00000599515 1080 ntBASIC13.32□□□□□ -0.28
TMEM54Q969K7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 FLJ16779-201ENST00000612722 7638 ntBASIC13.32□□□□□ -0.28
TMEM54Q969K7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.32□□□□□ -0.28
TMEM54Q969K7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TMEM54Q969K7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 MTHFR-210ENST00000641407 2387 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 COX5BP8-201ENST00000416911 349 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 TLE1P1-201ENST00000422965 589 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AL355864.2-201ENST00000447420 863 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 FO681548.1-201ENST00000455617 1132 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AC106760.1-201ENST00000508690 800 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 SLC25A47P1-201ENST00000531577 414 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 RN7SL48P-201ENST00000579283 293 ntBASIC13.31□□□□□ -0.28
TMEM54Q969K7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM54Q969K7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM54Q969K7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms