Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC073911.3-201ENST00000624401 631 ntBASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 AC020658.6-201ENST00000623564 1870 ntBASIC18.07■□□□□ 0.48
SNED1Q8TER0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SNED1Q8TER0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNED1Q8TER0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC092299.1-201ENST00000632679 757 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AL590440.2-201ENST00000641973 1595 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC008894.3-201ENST00000624324 3103 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC013726.1-201ENST00000563747 2285 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AP000845.1-201ENST00000581677 2131 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 TSPY25P-201ENST00000429463 745 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 RPSAP15-201ENST00000448168 861 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC079112.1-201ENST00000454972 939 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 AC018463.1-201ENST00000456674 917 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 RN7SL81P-201ENST00000493781 261 ntBASIC18.06■□□□□ 0.48
SNED1Q8TER0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNED1Q8TER0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
SNED1Q8TER0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 AC007292.2-201ENST00000593524 1812 ntBASIC18.05■□□□□ 0.48
SNED1Q8TER0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 IL9RP3-201ENST00000442856 1674 ntBASIC18.05■□□□□ 0.48
SNED1Q8TER0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 BANF1P3-201ENST00000412556 261 ntBASIC18.05■□□□□ 0.48
SNED1Q8TER0 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 AC093752.3-201ENST00000567343 901 ntBASIC18.05■□□□□ 0.48
SNED1Q8TER0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 AL132780.4-201ENST00000624870 1135 ntBASIC18.05■□□□□ 0.48
SNED1Q8TER0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNED1Q8TER0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNED1Q8TER0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNED1Q8TER0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms