Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC007787.1-201ENST00000588095 1583 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC007292.2-201ENST00000593524 1812 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 SPDYE19P-201ENST00000338590 713 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 MEP1AP4-201ENST00000423244 1087 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RNA5SP421-201ENST00000516864 134 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AL049840.4-201ENST00000602422 811 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AL391069.4-201ENST00000609583 481 ntBASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAF3IP1Q8TDR0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 RPL13AP25-201ENST00000484130 612 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 INGX-202ENST00000489074 768 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC023310.3-201ENST00000557027 670 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC100756.1-201ENST00000562736 682 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC138749.3-201ENST00000567691 622 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC116165.1-201ENST00000611806 668 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms