Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 HIST1H2APS2-201ENST00000454426 370 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 CTBP2P6-201ENST00000526402 1229 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AL596087.1-201ENST00000400979 1969 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC023090.2-201ENST00000625182 2110 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 OR52M2P-201ENST00000414298 959 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 GUSBP10-201ENST00000417412 665 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC027612.2-202ENST00000445955 1199 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC024909.3-201ENST00000611513 2257 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC012508.2-201ENST00000567613 1472 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC021305.1-201ENST00000520656 1514 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AC120498.9-201ENST00000339021 3867 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 AGGF1P1-201ENST00000509500 2073 ntBASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
ALMS1Q8TCU4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 OR8T1P-201ENST00000421347 918 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 BPIFB5P-201ENST00000457066 1099 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 FUCA1P1-201ENST00000374476 1351 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 LINC00528-201ENST00000600723 2160 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 ALG1L7P-201ENST00000502317 768 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 FAM86B3P-203ENST00000523992 854 ntBASIC9.85□□□□□ -0.83
ALMS1Q8TCU4 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms