Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC022616.1-201ENST00000518688 554 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 AC068587.10-201ENST00000641210 219 ntBASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHKBP1Q8TBC3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 AC006486.2-201ENST00000624246 2199 ntBASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 MIR663B-201ENST00000408361 115 ntBASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 AC004898.1-201ENST00000451057 766 ntBASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 COX5BP1-201ENST00000507622 393 ntBASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.9■□□□□ 0.14
SHKBP1Q8TBC3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
SHKBP1Q8TBC3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 CALR4P-201ENST00000431943 946 ntBASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 HSPB1P2-201ENST00000448722 546 ntBASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AP003171.2-201ENST00000528208 925 ntBASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 OR10B1P-201ENST00000601666 907 ntBASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.89■□□□□ 0.13
SHKBP1Q8TBC3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms