Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 AC138466.3-201ENST00000619983 221 ntBASIC16.27■□□□□ 0.2
BEST2Q8NFU1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST2Q8NFU1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST2Q8NFU1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 OR10B1P-201ENST00000601666 907 ntBASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MIR6869-201ENST00000619434 62 ntBASIC16.26■□□□□ 0.19
BEST2Q8NFU1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 AC006486.2-201ENST00000624246 2199 ntBASIC16.26■□□□□ 0.19
BEST2Q8NFU1 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.26■□□□□ 0.19
BEST2Q8NFU1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.26■□□□□ 0.19
BEST2Q8NFU1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 COX5BP1-201ENST00000507622 393 ntBASIC16.25■□□□□ 0.19
BEST2Q8NFU1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST2Q8NFU1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms