Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC098850.1-201ENST00000419919 790 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 HLA-K-203ENST00000430151 1046 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SPCS2P1-201ENST00000561636 679 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AL359711.2-201ENST00000563105 872 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AC008761.3-201ENST00000624803 892 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 KRT8P22-201ENST00000562317 1415 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 AL137783.1-201ENST00000623494 1896 ntBASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP43Q8NFH3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AC018529.2-202ENST00000611482 3087 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 MIR661-201ENST00000384842 89 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SOCS2P1-201ENST00000417727 557 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 MYCLP2-201ENST00000449268 967 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AP001582.1-201ENST00000525856 295 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SPDYE22P-201ENST00000582158 798 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 RN7SL204P-201ENST00000582831 262 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AC133539.2-201ENST00000604757 467 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 INTS4P1-203ENST00000641008 3683 ntBASIC14.22□□□□□ -0.13
NUP43Q8NFH3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NUP43Q8NFH3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC018442.1-201ENST00000421439 2061 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms