Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CPEB3Q8NE35 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AL645937.2-201ENST00000396808 931 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AP006294.1-201ENST00000415407 339 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AP005018.1-201ENST00000525475 301 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 CLUHP6-201ENST00000580789 941 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 PRSS30P-206ENST00000641773 873 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 AJ011931.1-201ENST00000618749 2492 ntBASIC13.31□□□□□ -0.28
CPEB3Q8NE35 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CPEB3Q8NE35 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 NUS1P3-201ENST00000423502 862 ntBASIC13.3□□□□□ -0.28
CPEB3Q8NE35 HLA-K-203ENST00000430151 1046 ntBASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AL162726.2-201ENST00000438986 1017 ntBASIC13.3□□□□□ -0.28
CPEB3Q8NE35 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.3□□□□□ -0.28
CPEB3Q8NE35 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms