Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC011495.1-201ENST00000498085 584 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 AL358472.5-202ENST00000641448 1267 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 LINC02228-204ENST00000642115 2962 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 FGD5P1-202ENST00000614866 2498 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 LRRC59-203ENST00000576448 1531 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 LINC01101-201ENST00000622953 1884 ntBASIC15.57■□□□□ 0.08
ATPAF2Q8N5M1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 ACKR1-201ENST00000368121 1240 ntBASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AC022616.1-201ENST00000518688 554 ntBASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AC010319.3-201ENST00000597028 470 ntBASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATPAF2Q8N5M1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 AL513477.1-201ENST00000602865 2407 ntBASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 KRT8P35-201ENST00000483942 1338 ntBASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 ACTBP8-201ENST00000403258 1108 ntBASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 AC093433.1-201ENST00000458048 571 ntBASIC15.55■□□□□ 0.08
ATPAF2Q8N5M1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms