Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL023803.2-201ENST00000620080 638 ntBASIC23.3■■□□□ 1.32
VPS8Q8N3P4 MVK-217ENST00000639206 367 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 F10-203ENST00000409306 1450 ntTSL 3 BASIC23.3■■□□□ 1.32
VPS8Q8N3P4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 DPM3-202ENST00000368399 517 ntBASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AGER-203ENST00000375065 665 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AC016700.1-201ENST00000429424 312 ntBASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SCARNA20.5-201ENST00000516991 142 ntBASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AC022217.1-201ENST00000521069 738 ntBASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AC100827.2-201ENST00000563214 1194 ntBASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VPS8Q8N3P4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 KRT18P36-201ENST00000411618 1276 ntBASIC23.28■■□□□ 1.32
VPS8Q8N3P4 BX284668.4-201ENST00000453917 508 ntBASIC23.28■■□□□ 1.32
VPS8Q8N3P4 AC006122.1-201ENST00000493323 440 ntBASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 AC005962.1-201ENST00000584100 773 ntBASIC23.28■■□□□ 1.32
VPS8Q8N3P4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 MTHFR-210ENST00000641407 2387 ntBASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS8Q8N3P4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 FAM90A7P-201ENST00000382628 1395 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 FAM90A23P-201ENST00000400136 1395 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 AC004899.1-201ENST00000424687 1714 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 FAM58BP-201ENST00000439056 645 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 TUBB8P8-201ENST00000458717 1058 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 HLA-J-204ENST00000495278 958 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 MBLAC2-202ENST00000514906 1936 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 AL645939.5-201ENST00000606834 243 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 AC023824.1-201ENST00000562945 2975 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
VPS8Q8N3P4 CICP24-201ENST00000605464 2705 ntBASIC23.27■■□□□ 1.32
VPS8Q8N3P4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms