Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC015910.1-201ENST00000579400 975 ntBASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC018635.2-201ENST00000608625 364 ntBASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AC007663.3-201ENST00000609632 465 ntBASIC16.13■□□□□ 0.17
RNF135Q8IUD6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 HLA-C-210ENST00000640219 976 ntBASIC16.13■□□□□ 0.17
RNF135Q8IUD6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 AL121723.1-201ENST00000445194 1519 ntBASIC16.13■□□□□ 0.17
RNF135Q8IUD6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF135Q8IUD6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 AC011477.6-201ENST00000604980 1927 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 AC069218.1-201ENST00000435269 762 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 RN7SL11P-201ENST00000471305 293 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 IQSEC3P1-201ENST00000538799 536 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 AC144831.1-201ENST00000573312 2656 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 KRT8P35-201ENST00000483942 1338 ntBASIC16.12■□□□□ 0.17
RNF135Q8IUD6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF135Q8IUD6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CICP13-201ENST00000422015 2789 ntBASIC16.11■□□□□ 0.17
RNF135Q8IUD6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.11■□□□□ 0.17
RNF135Q8IUD6 AL596257.1-201ENST00000641463 2694 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms