Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AL118506.1-201ENST00000601296 3082 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC073439.1-201ENST00000624121 1774 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC004987.2-201ENST00000395959 1148 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 DUSP5P1-201ENST00000441325 1139 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 MIR3652-201ENST00000579335 131 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AC093458.2-201ENST00000623150 629 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 AL645728.2-201ENST00000641974 660 ntBASIC12.67□□□□□ -0.38
ZNF546Q86UE3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF546Q86UE3 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MIR497HG-202ENST00000572453 3838 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 PCDHA5-203ENST00000614258 4248 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 AC004241.5-201ENST00000623870 2448 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 AC073621.1-201ENST00000392730 636 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 HMGA1P7-201ENST00000406908 502 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SAPCD2P3-201ENST00000455031 850 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 PHKG1P2-201ENST00000457537 863 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 OR7E14P-202ENST00000530490 1290 ntBASIC12.66□□□□□ -0.38
ZNF546Q86UE3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF546Q86UE3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms