Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 AC013726.1-201ENST00000563747 2285 ntBASIC15.21■□□□□ 0.03
DENND4AQ7Z401 REXO1L2P-201ENST00000425429 2069 ntBASIC15.21■□□□□ 0.03
DENND4AQ7Z401 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.21■□□□□ 0.03
DENND4AQ7Z401 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DENND4AQ7Z401 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DENND4AQ7Z401 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 AC007292.2-201ENST00000593524 1812 ntBASIC15.19■□□□□ 0.02
DENND4AQ7Z401 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 CR383656.3-201ENST00000551315 183 ntBASIC15.19■□□□□ 0.02
DENND4AQ7Z401 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.19■□□□□ 0.02
DENND4AQ7Z401 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms