Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AJ011931.1-201ENST00000618749 2492 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL391825.1-201ENST00000457671 1364 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AC004066.1-201ENST00000502488 802 ntBASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AC093813.1-201ENST00000605066 256 ntBASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AC093726.1-201ENST00000608064 963 ntBASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NHLRC1Q6VVB1 AC007541.1-201ENST00000570282 1469 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AC013726.1-201ENST00000563747 2285 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AL137784.3-201ENST00000623858 2288 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AC236430.1-201ENST00000402231 743 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms