Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.08■□□□□ 0
ZNF549Q6P9A3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
ZNF549Q6P9A3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
ZNF549Q6P9A3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.08■□□□□ 0
ZNF549Q6P9A3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.08■□□□□ 0
ZNF549Q6P9A3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 AC123567.1-201ENST00000548294 1261 ntBASIC15.07■□□□□ 0
ZNF549Q6P9A3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 RN7SL204P-201ENST00000582831 262 ntBASIC15.07■□□□□ 0
ZNF549Q6P9A3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
ZNF549Q6P9A3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.07■□□□□ 0
ZNF549Q6P9A3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC007326.2-201ENST00000624224 7579 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AL442647.2-201ENST00000429864 857 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC104596.2-201ENST00000512793 793 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 SPCS2P1-201ENST00000561636 679 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 LINC02560-201ENST00000596379 459 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AL096865.1-201ENST00000606796 927 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC007431.3-201ENST00000623221 587 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 BX539320.1-201ENST00000623759 877 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 AC023090.2-201ENST00000625182 2110 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 KRT8P22-201ENST00000562317 1415 ntBASIC15.06■□□□□ 0
ZNF549Q6P9A3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.06■□□□□ 0
ZNF549Q6P9A3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ZNF549Q6P9A3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms