Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 BAATP1-201ENST00000412284 1225 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC012441.1-201ENST00000446669 685 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 FO681548.1-201ENST00000455617 1132 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC145423.3-201ENST00000615987 467 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC025048.6-201ENST00000634326 1161 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 AC003102.2-201ENST00000589195 1469 ntBASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO1Q2MKA7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 KRT18P25-201ENST00000508931 1278 ntBASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 MIR5189-201ENST00000577370 114 ntBASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 AC134312.5-201ENST00000568031 1313 ntBASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO1Q2MKA7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 AL138709.1-201ENST00000614840 1693 ntBASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 AC015802.1-201ENST00000588104 1449 ntBASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO1Q2MKA7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms