Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
EFNB3Q15768 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
EFNB3Q15768 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 AC023157.3-201ENST00000619086 2088 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 REXO1L5P-201ENST00000622260 2098 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB3Q15768 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB3Q15768 CNN2P10-201ENST00000443067 918 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 HOMER2P2-201ENST00000451621 847 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.92□□□□□ -0.34
EFNB3Q15768 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.92□□□□□ -0.34
EFNB3Q15768 MIR6869-201ENST00000619434 62 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 AC126365.1-201ENST00000578585 1514 ntBASIC12.92□□□□□ -0.34
EFNB3Q15768 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.92□□□□□ -0.34
EFNB3Q15768 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
EFNB3Q15768 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
EFNB3Q15768 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
EFNB3Q15768 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
EFNB3Q15768 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.91□□□□□ -0.34
EFNB3Q15768 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.91□□□□□ -0.34
EFNB3Q15768 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
EFNB3Q15768 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.91□□□□□ -0.34
EFNB3Q15768 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
EFNB3Q15768 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.91□□□□□ -0.34
EFNB3Q15768 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms