Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 REXO1L5P-201ENST00000622260 2098 ntBASIC16.65■□□□□ 0.26
NFX1Q12986 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.65■□□□□ 0.26
NFX1Q12986 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 AC055811.4-201ENST00000624039 1754 ntBASIC16.65■□□□□ 0.26
NFX1Q12986 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 RPL5P21-201ENST00000404620 815 ntBASIC16.65■□□□□ 0.26
NFX1Q12986 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.65■□□□□ 0.26
NFX1Q12986 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NFX1Q12986 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 OR10B1P-201ENST00000601666 907 ntBASIC16.65■□□□□ 0.26
NFX1Q12986 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
NFX1Q12986 AC244452.3-201ENST00000636814 210 ntBASIC16.65■□□□□ 0.26
NFX1Q12986 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.65■□□□□ 0.26
NFX1Q12986 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
NFX1Q12986 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NFX1Q12986 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
NFX1Q12986 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NFX1Q12986 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NFX1Q12986 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.64■□□□□ 0.25
NFX1Q12986 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NFX1Q12986 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.64■□□□□ 0.25
NFX1Q12986 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.64■□□□□ 0.25
NFX1Q12986 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NFX1Q12986 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
NFX1Q12986 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.64■□□□□ 0.25
NFX1Q12986 POM121L8P-201ENST00000417732 1281 ntBASIC16.64■□□□□ 0.25
NFX1Q12986 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.64■□□□□ 0.25
NFX1Q12986 POM121L9P-203ENST00000441984 1285 ntBASIC16.64■□□□□ 0.25
NFX1Q12986 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.64■□□□□ 0.25
NFX1Q12986 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.64■□□□□ 0.25
NFX1Q12986 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.64■□□□□ 0.25
NFX1Q12986 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.64■□□□□ 0.25
NFX1Q12986 PPY2P-201ENST00000582808 702 ntBASIC16.64■□□□□ 0.25
NFX1Q12986 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.64■□□□□ 0.25
NFX1Q12986 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.64■□□□□ 0.25
NFX1Q12986 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.64■□□□□ 0.25
NFX1Q12986 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
NFX1Q12986 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.64■□□□□ 0.25
NFX1Q12986 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NFX1Q12986 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms