Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNA1Q09470 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNA1Q09470 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 MTHFR-210ENST00000641407 2387 ntBASIC16.65■□□□□ 0.26
KCNA1Q09470 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNA1Q09470 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
KCNA1Q09470 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
KCNA1Q09470 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNA1Q09470 GIMAP3P-201ENST00000495150 836 ntBASIC16.65■□□□□ 0.26
KCNA1Q09470 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 AC022616.1-201ENST00000518688 554 ntBASIC16.65■□□□□ 0.26
KCNA1Q09470 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNA1Q09470 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.65■□□□□ 0.26
KCNA1Q09470 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.65■□□□□ 0.26
KCNA1Q09470 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KCNA1Q09470 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 AL138709.1-201ENST00000614840 1693 ntBASIC16.65■□□□□ 0.26
KCNA1Q09470 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KCNA1Q09470 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KCNA1Q09470 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
KCNA1Q09470 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KCNA1Q09470 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KCNA1Q09470 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNA1Q09470 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 BCRP2-202ENST00000447763 634 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 GAPDHP21-201ENST00000450301 1010 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 KRT18P25-201ENST00000508931 1278 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 BCRP6-201ENST00000510112 632 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 BCRP7-201ENST00000511549 544 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.64■□□□□ 0.25
KCNA1Q09470 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 LRRC59-203ENST00000576448 1531 ntBASIC16.64■□□□□ 0.25
KCNA1Q09470 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.64■□□□□ 0.25
KCNA1Q09470 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.64■□□□□ 0.25
KCNA1Q09470 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KCNA1Q09470 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KCNA1Q09470 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.63■□□□□ 0.25
KCNA1Q09470 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.63■□□□□ 0.25
KCNA1Q09470 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KCNA1Q09470 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms