Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH11P55287 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH11P55287 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH11P55287 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDH11P55287 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
CDH11P55287 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH11P55287 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 GHSR-202ENST00000427970 912 ntBASIC13.98□□□□□ -0.17
CDH11P55287 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.98□□□□□ -0.17
CDH11P55287 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH11P55287 SERBP1P3-201ENST00000459980 809 ntBASIC13.98□□□□□ -0.17
CDH11P55287 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH11P55287 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
CDH11P55287 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH11P55287 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH11P55287 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH11P55287 AL133215.2-201ENST00000609242 977 ntBASIC13.98□□□□□ -0.17
CDH11P55287 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 AF228730.6-201ENST00000641497 218 ntBASIC13.98□□□□□ -0.17
CDH11P55287 AC084121.3-201ENST00000641716 218 ntBASIC13.98□□□□□ -0.17
CDH11P55287 AC105233.6-201ENST00000642093 218 ntBASIC13.98□□□□□ -0.17
CDH11P55287 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDH11P55287 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
CDH11P55287 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH11P55287 BX640514.1-201ENST00000583223 1918 ntBASIC13.98□□□□□ -0.17
CDH11P55287 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 LINC01230-201ENST00000625222 3017 ntBASIC13.97□□□□□ -0.17
CDH11P55287 AC126335.2-201ENST00000623362 4637 ntBASIC13.97□□□□□ -0.17
CDH11P55287 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 C8orf49-201ENST00000525043 1968 ntBASIC13.97□□□□□ -0.17
CDH11P55287 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 AC009477.1-201ENST00000452936 217 ntBASIC13.97□□□□□ -0.17
CDH11P55287 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.97□□□□□ -0.17
CDH11P55287 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 AC012645.4-201ENST00000610691 1061 ntBASIC13.97□□□□□ -0.17
CDH11P55287 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.97□□□□□ -0.17
CDH11P55287 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.97□□□□□ -0.17
CDH11P55287 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDH11P55287 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms