Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKN2DP55273 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKN2DP55273 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKN2DP55273 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.97□□□□□ -0.01
CDKN2DP55273 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKN2DP55273 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKN2DP55273 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKN2DP55273 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKN2DP55273 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.97□□□□□ -0.01
CDKN2DP55273 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDKN2DP55273 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.97□□□□□ -0.01
CDKN2DP55273 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDKN2DP55273 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.97□□□□□ -0.01
CDKN2DP55273 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 FLJ16779-201ENST00000612722 7638 ntBASIC14.96□□□□□ -0.01
CDKN2DP55273 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKN2DP55273 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKN2DP55273 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDKN2DP55273 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 SOCS2P1-201ENST00000417727 557 ntBASIC14.96□□□□□ -0.01
CDKN2DP55273 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKN2DP55273 MYCLP2-201ENST00000449268 967 ntBASIC14.96□□□□□ -0.01
CDKN2DP55273 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.96□□□□□ -0.01
CDKN2DP55273 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKN2DP55273 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKN2DP55273 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
CDKN2DP55273 DUX4L47-201ENST00000566374 394 ntBASIC14.96□□□□□ -0.01
CDKN2DP55273 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.96□□□□□ -0.01
CDKN2DP55273 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.96□□□□□ -0.01
CDKN2DP55273 AC004233.3-201ENST00000607794 1269 ntBASIC14.96□□□□□ -0.01
CDKN2DP55273 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDKN2DP55273 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDKN2DP55273 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDKN2DP55273 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.96□□□□□ -0.02
CDKN2DP55273 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDKN2DP55273 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDKN2DP55273 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.96□□□□□ -0.02
CDKN2DP55273 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDKN2DP55273 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDKN2DP55273 AC117489.1-201ENST00000625169 3217 ntBASIC14.96□□□□□ -0.02
CDKN2DP55273 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDKN2DP55273 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.96□□□□□ -0.02
CDKN2DP55273 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.95□□□□□ -0.02
CDKN2DP55273 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDKN2DP55273 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms