Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN4P51793 PUDPP3-201ENST00000445368 636 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN4P51793 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.84■□□□□ 0.13
CLCN4P51793 PRKXP1-201ENST00000561423 1122 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.84■□□□□ 0.13
CLCN4P51793 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 AL353726.2-201ENST00000623259 884 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLCN4P51793 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.84■□□□□ 0.13
CLCN4P51793 AC011840.2-201ENST00000563063 1520 ntBASIC15.84■□□□□ 0.13
CLCN4P51793 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
CLCN4P51793 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN4P51793 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN4P51793 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN4P51793 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CLCN4P51793 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN4P51793 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN4P51793 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.83■□□□□ 0.13
CLCN4P51793 PRAL-201ENST00000624952 3286 ntBASIC15.83■□□□□ 0.13
CLCN4P51793 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN4P51793 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLCN4P51793 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.83■□□□□ 0.13
CLCN4P51793 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN4P51793 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 AL596276.2-201ENST00000447525 331 ntBASIC15.83■□□□□ 0.12
CLCN4P51793 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN4P51793 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CLCN4P51793 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 AC105250.1-201ENST00000509378 2057 ntBASIC15.83■□□□□ 0.12
CLCN4P51793 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCN4P51793 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN4P51793 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN4P51793 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 AC132872.4-202ENST00000622924 2756 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 AC020910.5-201ENST00000623668 1865 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 REXO1L4P-201ENST00000605109 1937 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCN4P51793 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCN4P51793 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCN4P51793 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 FAM58BP-201ENST00000439056 645 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 AC006335.1-201ENST00000445200 547 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCN4P51793 RPL18P13-201ENST00000478088 569 ntBASIC15.82■□□□□ 0.12
CLCN4P51793 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN4P51793 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN4P51793 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN4P51793 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms