Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLCN3P51790 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLCN3P51790 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN3P51790 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN3P51790 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.56■□□□□ 0.24
CLCN3P51790 AC091951.1-201ENST00000512854 2465 ntBASIC16.56■□□□□ 0.24
CLCN3P51790 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCN3P51790 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 WASH3P-207ENST00000560956 1394 ntBASIC16.56■□□□□ 0.24
CLCN3P51790 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.56■□□□□ 0.24
CLCN3P51790 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN3P51790 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLCN3P51790 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLCN3P51790 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.56■□□□□ 0.24
CLCN3P51790 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 AC007663.3-201ENST00000609632 465 ntBASIC16.56■□□□□ 0.24
CLCN3P51790 AL139099.5-201ENST00000635274 300 ntBASIC16.56■□□□□ 0.24
CLCN3P51790 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.56■□□□□ 0.24
CLCN3P51790 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
CLCN3P51790 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CLCN3P51790 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLCN3P51790 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN3P51790 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN3P51790 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN3P51790 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN3P51790 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLCN3P51790 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 AL138725.1-201ENST00000407347 1314 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLCN3P51790 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLCN3P51790 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CLCN3P51790 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLCN3P51790 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.55■□□□□ 0.24
CLCN3P51790 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.55■□□□□ 0.24
CLCN3P51790 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 AL354877.1-201ENST00000424412 413 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN3P51790 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.55■□□□□ 0.24
CLCN3P51790 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN3P51790 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.55■□□□□ 0.24
CLCN3P51790 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.55■□□□□ 0.24
CLCN3P51790 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN3P51790 AL451050.2-201ENST00000606967 682 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 AL136301.1-201ENST00000615830 422 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.55■□□□□ 0.24
CLCN3P51790 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 LINC00554-201ENST00000564841 3011 ntBASIC16.55■□□□□ 0.24
CLCN3P51790 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLCN3P51790 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.55■□□□□ 0.24
CLCN3P51790 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms