Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.12□□□□□ -0.31
HCFC1P51610 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 AC022532.1-201ENST00000624563 1728 ntBASIC13.11□□□□□ -0.31
HCFC1P51610 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.11□□□□□ -0.31
HCFC1P51610 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.11□□□□□ -0.31
HCFC1P51610 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 AC010141.1-201ENST00000411585 623 ntBASIC13.11□□□□□ -0.31
HCFC1P51610 AC021723.1-201ENST00000486306 515 ntBASIC13.11□□□□□ -0.31
HCFC1P51610 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.11□□□□□ -0.31
HCFC1P51610 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.11□□□□□ -0.31
HCFC1P51610 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.11□□□□□ -0.31
HCFC1P51610 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
HCFC1P51610 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.11□□□□□ -0.31
HCFC1P51610 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
HCFC1P51610 AC006480.2-201ENST00000609770 1337 ntBASIC13.11□□□□□ -0.31
HCFC1P51610 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HCFC1P51610 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 MST1L-201ENST00000442552 2185 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.1□□□□□ -0.31
HCFC1P51610 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.1□□□□□ -0.31
HCFC1P51610 AL596276.2-201ENST00000447525 331 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.1□□□□□ -0.31
HCFC1P51610 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.1□□□□□ -0.31
HCFC1P51610 AC023824.1-201ENST00000562945 2975 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 AC009093.2-202ENST00000620513 2079 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 AL157791.1-201ENST00000553667 1699 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HCFC1P51610 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HCFC1P51610 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.1□□□□□ -0.31
HCFC1P51610 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.1□□□□□ -0.31
HCFC1P51610 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.1□□□□□ -0.31
HCFC1P51610 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.1□□□□□ -0.31
HCFC1P51610 AC005962.1-201ENST00000584100 773 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 AC092127.1-201ENST00000567093 3455 ntBASIC13.1□□□□□ -0.31
HCFC1P51610 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.1□□□□□ -0.31
HCFC1P51610 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HCFC1P51610 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.09□□□□□ -0.31
HCFC1P51610 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HCFC1P51610 AC244394.1-201ENST00000435000 1665 ntBASIC13.09□□□□□ -0.31
HCFC1P51610 AC138969.2-201ENST00000532739 9932 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms