Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
MTHFRP42898 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.83■□□□□ 0.13
MTHFRP42898 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MTHFRP42898 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
MTHFRP42898 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.83■□□□□ 0.12
MTHFRP42898 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.83■□□□□ 0.12
MTHFRP42898 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.83■□□□□ 0.12
MTHFRP42898 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 GHSR-202ENST00000427970 912 ntBASIC15.83■□□□□ 0.12
MTHFRP42898 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.83■□□□□ 0.12
MTHFRP42898 AL353770.1-201ENST00000614915 403 ntBASIC15.83■□□□□ 0.12
MTHFRP42898 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MTHFRP42898 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
MTHFRP42898 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
MTHFRP42898 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
MTHFRP42898 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
MTHFRP42898 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
MTHFRP42898 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.83■□□□□ 0.12
MTHFRP42898 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MTHFRP42898 AL157791.1-201ENST00000553667 1699 ntBASIC15.83■□□□□ 0.12
MTHFRP42898 AC004899.1-201ENST00000424687 1714 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 AC063926.3-201ENST00000624734 5658 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 AC092384.3-202ENST00000564646 2873 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.82■□□□□ 0.12
MTHFRP42898 AC104640.1-201ENST00000562617 2109 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 AC104073.2-201ENST00000453737 312 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.82■□□□□ 0.12
MTHFRP42898 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 AC068587.8-201ENST00000641239 219 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 CLUHP2-201ENST00000426660 1303 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
MTHFRP42898 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 AC055811.4-201ENST00000624039 1754 ntBASIC15.82■□□□□ 0.12
MTHFRP42898 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.82■□□□□ 0.12
MTHFRP42898 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MTHFRP42898 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MTHFRP42898 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.81■□□□□ 0.12
MTHFRP42898 AC069218.1-201ENST00000435269 762 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.81■□□□□ 0.12
MTHFRP42898 AC125604.1-201ENST00000496255 707 ntBASIC15.81■□□□□ 0.12
MTHFRP42898 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.81■□□□□ 0.12
MTHFRP42898 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MTHFRP42898 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.81■□□□□ 0.12
MTHFRP42898 IQSEC3P1-201ENST00000538799 536 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms