Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 MIR326-201ENST00000362220 95 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 BTBD6P1-201ENST00000412176 1267 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.89□□□□□ -0.03
TRIM23P36406 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 CHMP1AP1-201ENST00000445563 662 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 AC108725.1-201ENST00000495472 409 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 AP006547.1-201ENST00000563435 692 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM23P36406 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 AC138035.3-201ENST00000622706 2791 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 FKBP4P6-201ENST00000457486 1332 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM23P36406 AL023775.1-201ENST00000454907 1746 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 AL109954.1-202ENST00000564051 2148 ntBASIC14.89□□□□□ -0.03
TRIM23P36406 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM23P36406 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM23P36406 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 AL136309.1-201ENST00000403917 691 ntBASIC14.88□□□□□ -0.03
TRIM23P36406 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM23P36406 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 AL591846.1-201ENST00000451736 433 ntBASIC14.88□□□□□ -0.03
TRIM23P36406 RPSAP36-202ENST00000494591 1261 ntBASIC14.88□□□□□ -0.03
TRIM23P36406 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM23P36406 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM23P36406 PPY2P-201ENST00000582808 702 ntBASIC14.88□□□□□ -0.03
TRIM23P36406 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 AC138696.2-201ENST00000607376 223 ntBASIC14.88□□□□□ -0.03
TRIM23P36406 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM23P36406 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM23P36406 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM23P36406 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
TRIM23P36406 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM23P36406 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM23P36406 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM23P36406 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms