Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.47■□□□□ 0.07
PTPN3P26045 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.47■□□□□ 0.07
PTPN3P26045 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.47■□□□□ 0.07
PTPN3P26045 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTPN3P26045 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PTPN3P26045 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PTPN3P26045 DGCR5-201ENST00000399539 862 ntBASIC15.46■□□□□ 0.07
PTPN3P26045 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.46■□□□□ 0.07
PTPN3P26045 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.46■□□□□ 0.07
PTPN3P26045 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.46■□□□□ 0.07
PTPN3P26045 AP005019.2-201ENST00000615104 511 ntBASIC15.46■□□□□ 0.07
PTPN3P26045 CU634019.7-201ENST00000624153 1185 ntBASIC15.46■□□□□ 0.07
PTPN3P26045 FP236241.2-201ENST00000624906 1185 ntBASIC15.46■□□□□ 0.07
PTPN3P26045 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.46■□□□□ 0.07
PTPN3P26045 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTPN3P26045 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN3P26045 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN3P26045 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
PTPN3P26045 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.46■□□□□ 0.06
PTPN3P26045 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PTPN3P26045 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN3P26045 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PTPN3P26045 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN3P26045 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 EIF3FP3-201ENST00000434851 1086 ntBASIC15.45■□□□□ 0.06
PTPN3P26045 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.45■□□□□ 0.06
PTPN3P26045 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN3P26045 CRB3P1-201ENST00000449338 276 ntBASIC15.45■□□□□ 0.06
PTPN3P26045 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN3P26045 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.45■□□□□ 0.06
PTPN3P26045 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.45■□□□□ 0.06
PTPN3P26045 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.45■□□□□ 0.06
PTPN3P26045 AC023908.3-201ENST00000564211 3047 ntBASIC15.45■□□□□ 0.06
PTPN3P26045 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.45■□□□□ 0.06
PTPN3P26045 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PTPN3P26045 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTPN3P26045 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTPN3P26045 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
PTPN3P26045 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PTPN3P26045 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms