Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH3P22223 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH3P22223 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH3P22223 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH3P22223 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 OR8S1-201ENST00000310194 1080 ntBASIC14.96□□□□□ -0.01
CDH3P22223 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH3P22223 TMEM14DP-201ENST00000422205 345 ntBASIC14.96□□□□□ -0.01
CDH3P22223 U91328.1-201ENST00000437528 223 ntBASIC14.96□□□□□ -0.01
CDH3P22223 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH3P22223 ENPP7P5-201ENST00000541031 1031 ntBASIC14.96□□□□□ -0.01
CDH3P22223 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH3P22223 AC124283.3-201ENST00000570869 594 ntBASIC14.96□□□□□ -0.01
CDH3P22223 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH3P22223 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH3P22223 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH3P22223 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH3P22223 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH3P22223 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH3P22223 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDH3P22223 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH3P22223 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CDH3P22223 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.96□□□□□ -0.02
CDH3P22223 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH3P22223 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CDH3P22223 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 AC127383.1-201ENST00000444697 1800 ntBASIC14.95□□□□□ -0.02
CDH3P22223 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH3P22223 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH3P22223 AC244107.1-201ENST00000442033 332 ntBASIC14.95□□□□□ -0.02
CDH3P22223 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.95□□□□□ -0.02
CDH3P22223 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 TDH-203ENST00000531764 1110 ntBASIC14.95□□□□□ -0.02
CDH3P22223 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH3P22223 AC107373.2-201ENST00000607735 490 ntBASIC14.95□□□□□ -0.02
CDH3P22223 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH3P22223 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
CDH3P22223 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH3P22223 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH3P22223 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH3P22223 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms